Veggie Egg Muffins Protein Bites

These fluffy egg muffins combine fresh baby spinach, red bell pepper, cherry tomatoes, and cheddar cheese into a simple protein-rich bite. Whisked eggs mixed with savory herbs create a light, savory base that bakes into golden, portable portions. Ideal for breakfast or an on-the-go snack, these muffins offer a balanced blend of vibrant vegetables and comforting dairy flavors. Easy to customize with your favorite veggies or herbs, they store well in the fridge or freezer for convenient, healthy options any time.

Updated on Tue, 23 Dec 2025 15:46:00 GMT
Golden-brown veggie egg muffins, featuring colorful bell peppers and tomatoes, baked to perfection. Save to Pinterest
Golden-brown veggie egg muffins, featuring colorful bell peppers and tomatoes, baked to perfection. | amberthicket.com

These egg muffins came into my life during a hectic Monday morning when I was scrambling to figure out breakfast for the whole week. I'd bought too many vegetables and was tired of salads, so I threw them into a batter of whisked eggs almost by accident. Twenty minutes later, twelve golden little cups emerged from the oven, and I realized I'd accidentally solved the meal prep puzzle. Now they're my go-to when I want something that feels homemade but doesn't require me to think at 6 AM.

I brought a container of these to my friend's house last month, and watching her eat one cold straight from the fridge while standing at her kitchen counter—barely even pausing—told me everything. She texted me later asking for the recipe because her kids actually requested them for lunch. That's when I knew these muffins were the real deal.

Ingredients

  • Baby spinach: It wilts down to almost nothing, so use more than you think you need—it's the easiest way to sneak in greens without tasting them.
  • Red bell pepper: The sweetness cuts through the eggs and gives you that pop of color that makes the whole thing feel less boring.
  • Cherry tomatoes: Quartered tomatoes won't release too much water like regular tomatoes would, which keeps your muffins from turning watery.
  • Red onion: Go fine with the dicing or it'll have these raw crunchy pieces that some people love and others avoid.
  • Large eggs: Eight eggs is the magic number—any fewer and they're dense, any more and they get rubbery.
  • Milk: A splash of milk makes them fluffier than eggs alone ever could.
  • Cheddar cheese: Sharp cheddar has more flavor than mild, so you need less of it, but feta gives you a briny complexity that's quietly sophisticated.
  • Garlic powder and oregano: These seasonings make people guess there's some kind of magic ingredient they can't identify.

Instructions

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Quickly cook hard boiled, poached, or scrambled eggs and omelets for easy breakfasts and meal prep.
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Set up and preheat:
Get your oven heating to 350°F and grease your muffin tin well—those corners are where eggs love to stick. If you have silicone cups, this step becomes almost unnecessary, which is why I've converted to them entirely.
Whisk the base:
Crack your eggs into a bowl and whisk them with milk, salt, pepper, and your seasonings until everything is pale and frothy. Don't skip the whisking—it's what makes them fluffy instead of dense.
Fold in vegetables:
Add your chopped vegetables and half the cheese, stirring gently so the spinach gets distributed evenly. If you stir too aggressively you'll bruise the vegetables and they'll release color into the egg.
Fill the tin:
Divide the mixture evenly among your muffin cups, filling each about three-quarters full. Use a spoon or small ladle so you get the same amount of vegetables in each one.
Top and bake:
Sprinkle the remaining cheese on top and slide into the oven for 18 to 22 minutes. You'll know they're done when the edges are set but the very center still has the slightest jiggle—they'll continue cooking slightly as they cool.
Cool and store:
Let them sit in the tin for a few minutes so they hold their shape when you remove them. This is also when the house smells absolutely amazing and your family starts asking when breakfast is ready.
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Quickly cook hard boiled, poached, or scrambled eggs and omelets for easy breakfasts and meal prep.
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Savory veggie egg muffins ready to eat, showing a colorful mix of vegetables and melted cheese. Save to Pinterest
Savory veggie egg muffins ready to eat, showing a colorful mix of vegetables and melted cheese. | amberthicket.com

My neighbor came over one morning and took one of these straight from the fridge without asking, and it became this running joke where she'd text me a photo of an empty container and I'd know it was time to make another batch. Food that makes people come back uninvited is the kind worth keeping around.

Vegetables You Can Swap In Anytime

The beauty of these muffins is that they're completely flexible with vegetables, so you can clean out your crisper drawer without guilt. Diced zucchini works beautifully if you pat it dry first—moisture is the only real enemy here. Mushrooms bring an earthy depth that pairs perfectly with sharp cheese, and broccoli florets stay crisp-tender even after baking. I've also used asparagus tips standing upright in the egg, which looks fancy but requires zero extra effort.

Fresh Herbs Change Everything

The dried oregano is a solid baseline, but fresh herbs are where these muffins get interesting. Chives scattered on top add a mild onion note, and fresh parsley makes them feel lighter somehow. I've even used fresh dill when I had it on hand, and it gave the whole thing an almost breakfast-sandwich quality that was surprisingly delicious.

Meal Prep and Storage Secrets

These muffins live in my fridge all week because they actually stay good—no getting weird or dry or developing that stale taste that makes you throw food away. Cold they're fine, microwaved for 30 to 45 seconds they're nearly as good as fresh, and frozen they'll keep for two months if you layer them in a freezer bag with parchment paper between each one. My system is to bake them on Sunday morning while I have my coffee, let them cool completely, then pack them into an airtight container where they're ready to grab on chaotic mornings.

  • Freeze them individually first, then transfer to a bag so they don't all stick together in a sad clump.
  • Don't bother thawing frozen ones—just microwave them for about 60 seconds and they're good.
  • The very first thing they'll absorb is any smell in your fridge, so keep the container sealed tight.
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Delicious homemade veggie egg muffins, a protein-packed meal prep idea for a quick breakfast. Save to Pinterest
Delicious homemade veggie egg muffins, a protein-packed meal prep idea for a quick breakfast. | amberthicket.com

These muffins have become the answer to so many breakfast dilemmas in my kitchen, and I keep coming back to them because they're genuinely good every single time. Make a batch this week and you'll understand why.

Recipe FAQs

Can I substitute the cheese in the muffins?

Yes, cheddar can be swapped for feta, mozzarella, or plant-based alternatives to suit dietary preferences.

How should I store these egg bites?

Keep them in an airtight container in the refrigerator for up to 4 days or freeze for longer storage.

Can I add other vegetables to these muffins?

Absolutely, vegetables like zucchini, mushrooms, or broccoli work well and add variety.

What is the best way to reheat the egg muffins?

Reheat gently in the microwave for 30 to 45 seconds or warm in a low oven until heated through.

Are these muffins suitable for a low-carb diet?

Yes, the low carbohydrate content makes them ideal for low-carb and gluten-free eating plans.

Veggie Egg Muffins Protein Bites

Fluffy egg muffins with spinach, peppers, and cheese, ideal for quick nutritious snacks or breakfast.

Prep Duration
15 minutes
Cook Duration
20 minutes
Overall Time
35 minutes
Created by Daniel Hughes


Skill Level Easy

Cuisine Origin American

Portion 4 Portions

Diet Details Vegetarian-Friendly, No Gluten, Reduced-Carb

What You'll Need

Vegetables

01 1 cup chopped baby spinach
02 1/2 cup diced red bell pepper
03 1/2 cup quartered cherry tomatoes
04 1/4 cup finely diced red onion

Eggs & Dairy

01 8 large eggs
02 1/4 cup milk (dairy or unsweetened plant-based)
03 1/2 cup shredded cheddar cheese (optional)
04 Salt, to taste
05 Black pepper, to taste

Herbs & Seasonings

01 1/2 teaspoon garlic powder
02 1/2 teaspoon dried oregano or Italian seasoning

How To Make It

Instruction 01

Prepare Oven and Muffin Tin: Preheat oven to 350°F. Grease a 12-cup muffin tin or line it with silicone muffin cups.

Instruction 02

Combine Wet Ingredients and Seasonings: In a large mixing bowl, whisk together eggs, milk, salt, pepper, garlic powder, and oregano until fully combined.

Instruction 03

Incorporate Vegetables and Cheese: Fold the chopped spinach, bell pepper, cherry tomatoes, red onion, and half of the shredded cheese into the egg mixture gently.

Instruction 04

Fill Muffin Cups: Distribute the mixture evenly among the prepared muffin cups, filling each about three-quarters full.

Instruction 05

Add Topping Cheese: Sprinkle the remaining cheese evenly on top of each filled muffin cup, if using.

Instruction 06

Bake: Bake for 18 to 22 minutes, or until muffins are set and lightly golden on top.

Instruction 07

Cool and Serve: Allow muffins to cool for a few minutes before removing from the tin. Serve warm or cool completely for storage.

Essential Tools

  • 12-cup muffin tin or silicone muffin cups
  • Mixing bowl
  • Whisk
  • Chopping board and knife

Allergy Notice

Always check ingredients for possible allergens. Consult a healthcare provider if you're unsure.
  • Contains eggs and dairy; plant-based alternatives recommended for allergy-sensitive individuals.
  • Gluten-free but cross-contamination may occur; verify ingredient labels if highly sensitive.

Nutrition Info (per serving)

For informational use only; not a substitute for advice from healthcare professionals.
  • Energy (kcal): 70
  • Fats: 4 g
  • Carbohydrates: 2 g
  • Proteins: 6 g